Cluster: HRGMv2_2813_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2813
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2813_23 | HRGMv2_2813_23_47 | 35983 | 37191 | - | GT1 |
| STP | HRGMv2_2813_23 | HRGMv2_2813_23_48 | 37184 | 37810 | - | TetR_N |
| TC | HRGMv2_2813_23 | HRGMv2_2813_23_49 | 38278 | 39300 | - | 4.B.1.1.1 |
| TC | HRGMv2_2813_23 | HRGMv2_2813_23_50 | 39302 | 40009 | - | 4.B.1.1.2 |
Gene ID: HRGMv2_2813_23_47
Type: CAZyme
Location: 35983 - 37191 (-)
Type: CAZyme
Location: 35983 - 37191 (-)
Gene ID: HRGMv2_2813_23_48
Type: STP
Location: 37184 - 37810 (-)
Type: STP
Location: 37184 - 37810 (-)
Gene ID: HRGMv2_2813_23_49
Type: TC
Location: 38278 - 39300 (-)
Type: TC
Location: 38278 - 39300 (-)
Gene ID: HRGMv2_2813_23_50
Type: TC
Location: 39302 - 40009 (-)
Type: TC
Location: 39302 - 40009 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus sp902765855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.