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Cluster: HRGMv2_2813_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2813_22 HRGMv2_2813_22_25 30184 32148 + 4.A.2.1.4
STP HRGMv2_2813_22 HRGMv2_2813_22_26 32229 32495 + PTS-HPr
TC HRGMv2_2813_22 HRGMv2_2813_22_27 32831 34552 + 8.A.7.1.1
pfam HRGMv2_2813_22 HRGMv2_2813_22_28 34549 35253 + DNA_alkylation
pfam HRGMv2_2813_22 HRGMv2_2813_22_29 35287 35847 + Hexapep | Mac | Hexapep_2 | Hexapep_2
CAZyme HRGMv2_2813_22 HRGMv2_2813_22_30 35924 36886 - GT2
Gene ID: HRGMv2_2813_22_25
Type: TC
Location: 30184 - 32148 (+)
Gene ID: HRGMv2_2813_22_26
Type: STP
Location: 32229 - 32495 (+)
Gene ID: HRGMv2_2813_22_27
Type: TC
Location: 32831 - 34552 (+)
Gene ID: HRGMv2_2813_22_28
Type: pfam
Location: 34549 - 35253 (+)
Gene ID: HRGMv2_2813_22_29
Type: pfam
Location: 35287 - 35847 (+)
Gene ID: HRGMv2_2813_22_30
Type: CAZyme
Location: 35924 - 36886 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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