Cluster: HRGMv2_2813_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2813
- CGC Family ID: CGCFAM_00546
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2813_4 | HRGMv2_2813_4_105 | 109111 | 110091 | - | GT2 |
| CAZyme | HRGMv2_2813_4 | HRGMv2_2813_4_106 | 110127 | 111023 | - | GT2 |
| TC | HRGMv2_2813_4 | HRGMv2_2813_4_107 | 111027 | 112142 | - | 4.D.2.1.5 |
| TC | HRGMv2_2813_4 | HRGMv2_2813_4_108 | 112446 | 114314 | - | 9.B.18.2.1 |
Gene ID: HRGMv2_2813_4_105
Type: CAZyme
Location: 109111 - 110091 (-)
Type: CAZyme
Location: 109111 - 110091 (-)
Gene ID: HRGMv2_2813_4_106
Type: CAZyme
Location: 110127 - 111023 (-)
Type: CAZyme
Location: 110127 - 111023 (-)
Gene ID: HRGMv2_2813_4_107
Type: TC
Location: 111027 - 112142 (-)
Type: TC
Location: 111027 - 112142 (-)
Gene ID: HRGMv2_2813_4_108
Type: TC
Location: 112446 - 114314 (-)
Type: TC
Location: 112446 - 114314 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus sp902765855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.