Cluster: HRGMv2_2809_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2809
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2809_3 | HRGMv2_2809_3_115 | 104489 | 105880 | + | 2.A.66.1.45 |
| pfam | HRGMv2_2809_3 | HRGMv2_2809_3_116 | 105877 | 106707 | + | Ubie_methyltran | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 | Zn_ribbon_RlmA |
| CAZyme | HRGMv2_2809_3 | HRGMv2_2809_3_117 | 106712 | 107626 | + | GH25 |
Gene ID: HRGMv2_2809_3_115
Type: TC
Location: 104489 - 105880 (+)
Type: TC
Location: 104489 - 105880 (+)
Gene ID: HRGMv2_2809_3_116
Type: pfam
Location: 105877 - 106707 (+)
Type: pfam
Location: 105877 - 106707 (+)
Gene ID: HRGMv2_2809_3_117
Type: CAZyme
Location: 106712 - 107626 (+)
Type: CAZyme
Location: 106712 - 107626 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900551355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2809_3_117 | vegetarian > omnivore | 1.58605 | 0.01135 |