Cluster: HRGMv2_2809_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2809
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2809_40 | HRGMv2_2809_40_1 | 2 | 316 | - | 3.A.18.1.1 |
| CAZyme | HRGMv2_2809_40 | HRGMv2_2809_40_2 | 416 | 2833 | - | GT35 |
| CAZyme | HRGMv2_2809_40 | HRGMv2_2809_40_3 | 2866 | 4299 | - | GT5 |
| pfam | HRGMv2_2809_40 | HRGMv2_2809_40_4 | 4326 | 5438 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2809_40 | HRGMv2_2809_40_5 | 5435 | 6643 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2809_40 | HRGMv2_2809_40_6 | 6640 | 8532 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_2809_40_1
Type: TC
Location: 2 - 316 (-)
Type: TC
Location: 2 - 316 (-)
Gene ID: HRGMv2_2809_40_2
Type: CAZyme
Location: 416 - 2833 (-)
Type: CAZyme
Location: 416 - 2833 (-)
Gene ID: HRGMv2_2809_40_3
Type: CAZyme
Location: 2866 - 4299 (-)
Type: CAZyme
Location: 2866 - 4299 (-)
Gene ID: HRGMv2_2809_40_4
Type: pfam
Location: 4326 - 5438 (-)
Type: pfam
Location: 4326 - 5438 (-)
Gene ID: HRGMv2_2809_40_5
Type: pfam
Location: 5435 - 6643 (-)
Type: pfam
Location: 5435 - 6643 (-)
Gene ID: HRGMv2_2809_40_6
Type: CAZyme
Location: 6640 - 8532 (-)
Type: CAZyme
Location: 6640 - 8532 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900551355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.