Cluster: HRGMv2_2808_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2808
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2808_12 | HRGMv2_2808_12_53 | 49738 | 51132 | + | 2.A.66.1.45 |
| pfam | HRGMv2_2808_12 | HRGMv2_2808_12_54 | 51129 | 51959 | + | Ubie_methyltran | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 | Zn_ribbon_RlmA |
| CAZyme | HRGMv2_2808_12 | HRGMv2_2808_12_55 | 51964 | 52878 | + | GH25 |
Gene ID: HRGMv2_2808_12_53
Type: TC
Location: 49738 - 51132 (+)
Type: TC
Location: 49738 - 51132 (+)
Gene ID: HRGMv2_2808_12_54
Type: pfam
Location: 51129 - 51959 (+)
Type: pfam
Location: 51129 - 51959 (+)
Gene ID: HRGMv2_2808_12_55
Type: CAZyme
Location: 51964 - 52878 (+)
Type: CAZyme
Location: 51964 - 52878 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp934591745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2808_12_55 | vegetarian > omnivore | 1.61107 | 0.00266 |