Cluster: HRGMv2_2808_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2808
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2808_11 | HRGMv2_2808_11_56 | 53805 | 54968 | - | 3.A.18.1.1 |
| CAZyme | HRGMv2_2808_11 | HRGMv2_2808_11_57 | 55068 | 57485 | - | GT35 |
| CAZyme | HRGMv2_2808_11 | HRGMv2_2808_11_58 | 57518 | 58951 | - | GT5 |
| pfam | HRGMv2_2808_11 | HRGMv2_2808_11_59 | 58978 | 60090 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2808_11 | HRGMv2_2808_11_60 | 60087 | 61295 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2808_11 | HRGMv2_2808_11_61 | 61292 | 63184 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_2808_11_56
Type: TC
Location: 53805 - 54968 (-)
Type: TC
Location: 53805 - 54968 (-)
Gene ID: HRGMv2_2808_11_57
Type: CAZyme
Location: 55068 - 57485 (-)
Type: CAZyme
Location: 55068 - 57485 (-)
Gene ID: HRGMv2_2808_11_58
Type: CAZyme
Location: 57518 - 58951 (-)
Type: CAZyme
Location: 57518 - 58951 (-)
Gene ID: HRGMv2_2808_11_59
Type: pfam
Location: 58978 - 60090 (-)
Type: pfam
Location: 58978 - 60090 (-)
Gene ID: HRGMv2_2808_11_60
Type: pfam
Location: 60087 - 61295 (-)
Type: pfam
Location: 60087 - 61295 (-)
Gene ID: HRGMv2_2808_11_61
Type: CAZyme
Location: 61292 - 63184 (-)
Type: CAZyme
Location: 61292 - 63184 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp934591745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2808_11_59 | vegetarian > vegan | 1.07619 | 0.00364 |