Cluster: HRGMv2_2802_CGC8
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_2802
- CGC Family ID: CGCFAM_00994
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2802_7 | HRGMv2_2802_7_30 | 34644 | 35810 | - | GT4 |
| pfam | HRGMv2_2802_7 | HRGMv2_2802_7_31 | 35821 | 36822 | - | Stealth_CR2 | Stealth_CR1 | Stealth_CR3 |
| TC | HRGMv2_2802_7 | HRGMv2_2802_7_32 | 36838 | 37746 | - | 9.B.97.6.2 |
| TC | HRGMv2_2802_7 | HRGMv2_2802_7_33 | 37830 | 39341 | - | 2.A.66.1.40 |
| pfam | HRGMv2_2802_7 | HRGMv2_2802_7_34 | 39413 | 40468 | - | Acyl_transf_3 |
| CAZyme | HRGMv2_2802_7 | HRGMv2_2802_7_35 | 40506 | 41483 | - | GT2 |
| pfam | HRGMv2_2802_7 | HRGMv2_2802_7_36 | 41486 | 42652 | - | EpsG |
| CAZyme | HRGMv2_2802_7 | HRGMv2_2802_7_37 | 42671 | 43768 | - | GT4 |
| CAZyme | HRGMv2_2802_7 | HRGMv2_2802_7_38 | 43761 | 44876 | - | GT4 |
| CAZyme | HRGMv2_2802_7 | HRGMv2_2802_7_39 | 44889 | 45890 | - | GT2 |
| CAZyme | HRGMv2_2802_7 | HRGMv2_2802_7_40 | 45902 | 46837 | - | GT2 |
| CAZyme | HRGMv2_2802_7 | HRGMv2_2802_7_41 | 46856 | 47845 | - | GT2 |
| CAZyme | HRGMv2_2802_7 | HRGMv2_2802_7_42 | 47869 | 48987 | - | GT4 |
Gene ID: HRGMv2_2802_7_30
Type: CAZyme
Location: 34644 - 35810 (-)
Type: CAZyme
Location: 34644 - 35810 (-)
Gene ID: HRGMv2_2802_7_31
Type: pfam
Location: 35821 - 36822 (-)
Type: pfam
Location: 35821 - 36822 (-)
Gene ID: HRGMv2_2802_7_32
Type: TC
Location: 36838 - 37746 (-)
Type: TC
Location: 36838 - 37746 (-)
Gene ID: HRGMv2_2802_7_33
Type: TC
Location: 37830 - 39341 (-)
Type: TC
Location: 37830 - 39341 (-)
Gene ID: HRGMv2_2802_7_34
Type: pfam
Location: 39413 - 40468 (-)
Type: pfam
Location: 39413 - 40468 (-)
Gene ID: HRGMv2_2802_7_35
Type: CAZyme
Location: 40506 - 41483 (-)
Type: CAZyme
Location: 40506 - 41483 (-)
Gene ID: HRGMv2_2802_7_36
Type: pfam
Location: 41486 - 42652 (-)
Type: pfam
Location: 41486 - 42652 (-)
Gene ID: HRGMv2_2802_7_37
Type: CAZyme
Location: 42671 - 43768 (-)
Type: CAZyme
Location: 42671 - 43768 (-)
Gene ID: HRGMv2_2802_7_38
Type: CAZyme
Location: 43761 - 44876 (-)
Type: CAZyme
Location: 43761 - 44876 (-)
Gene ID: HRGMv2_2802_7_39
Type: CAZyme
Location: 44889 - 45890 (-)
Type: CAZyme
Location: 44889 - 45890 (-)
Gene ID: HRGMv2_2802_7_40
Type: CAZyme
Location: 45902 - 46837 (-)
Type: CAZyme
Location: 45902 - 46837 (-)
Gene ID: HRGMv2_2802_7_41
Type: CAZyme
Location: 46856 - 47845 (-)
Type: CAZyme
Location: 46856 - 47845 (-)
Gene ID: HRGMv2_2802_7_42
Type: CAZyme
Location: 47869 - 48987 (-)
Type: CAZyme
Location: 47869 - 48987 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-177
Species
CAG-177 sp000431775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.