Cluster: HRGMv2_2802_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2802
- CGC Family ID: CGCFAM_03389
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2802_6 | HRGMv2_2802_6_25 | 34651 | 36384 | + | 3.A.1.135.5 |
| TC | HRGMv2_2802_6 | HRGMv2_2802_6_26 | 36384 | 38288 | + | 3.A.1.135.5 |
| pfam | HRGMv2_2802_6 | HRGMv2_2802_6_27 | 38550 | 39731 | - | Ala_racemase_C | Ala_racemase_N |
| CAZyme | HRGMv2_2802_6 | HRGMv2_2802_6_28 | 39752 | 40822 | - | GH179 |
Gene ID: HRGMv2_2802_6_25
Type: TC
Location: 34651 - 36384 (+)
Type: TC
Location: 34651 - 36384 (+)
Gene ID: HRGMv2_2802_6_26
Type: TC
Location: 36384 - 38288 (+)
Type: TC
Location: 36384 - 38288 (+)
Gene ID: HRGMv2_2802_6_27
Type: pfam
Location: 38550 - 39731 (-)
Type: pfam
Location: 38550 - 39731 (-)
Gene ID: HRGMv2_2802_6_28
Type: CAZyme
Location: 39752 - 40822 (-)
Type: CAZyme
Location: 39752 - 40822 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-177
Species
CAG-177 sp000431775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.