Cluster: HRGMv2_2802_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2802
- CGC Family ID: CGCFAM_01759
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2802_5 | HRGMv2_2802_5_57 | 50181 | 51596 | + | GT5 |
| TF | HRGMv2_2802_5 | HRGMv2_2802_5_58 | 51641 | 52288 | - | HTH_3 |
| pfam | HRGMv2_2802_5 | HRGMv2_2802_5_59 | 52407 | 53036 | + | His_Phos_1 |
| CAZyme | HRGMv2_2802_5 | HRGMv2_2802_5_60 | 53056 | 54804 | + | GH35 |
| TC | HRGMv2_2802_5 | HRGMv2_2802_5_61 | 55504 | 56118 | - | 3.A.2.3.2 |
| TC | HRGMv2_2802_5 | HRGMv2_2802_5_62 | 56130 | 57509 | - | 3.A.2.3.3 |
| TC | HRGMv2_2802_5 | HRGMv2_2802_5_63 | 57525 | 59276 | - | 3.A.2.3.1 |
Gene ID: HRGMv2_2802_5_57
Type: CAZyme
Location: 50181 - 51596 (+)
Type: CAZyme
Location: 50181 - 51596 (+)
Gene ID: HRGMv2_2802_5_58
Type: TF
Location: 51641 - 52288 (-)
Type: TF
Location: 51641 - 52288 (-)
Gene ID: HRGMv2_2802_5_59
Type: pfam
Location: 52407 - 53036 (+)
Type: pfam
Location: 52407 - 53036 (+)
Gene ID: HRGMv2_2802_5_60
Type: CAZyme
Location: 53056 - 54804 (+)
Type: CAZyme
Location: 53056 - 54804 (+)
Gene ID: HRGMv2_2802_5_61
Type: TC
Location: 55504 - 56118 (-)
Type: TC
Location: 55504 - 56118 (-)
Gene ID: HRGMv2_2802_5_62
Type: TC
Location: 56130 - 57509 (-)
Type: TC
Location: 56130 - 57509 (-)
Gene ID: HRGMv2_2802_5_63
Type: TC
Location: 57525 - 59276 (-)
Type: TC
Location: 57525 - 59276 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-177
Species
CAG-177 sp000431775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.