Cluster: HRGMv2_2802_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2802
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2802_5 | HRGMv2_2802_5_31 | 15288 | 17468 | + | GH2 |
| TC | HRGMv2_2802_5 | HRGMv2_2802_5_32 | 17458 | 18873 | + | 2.A.2.3.2 |
| STP | HRGMv2_2802_5 | HRGMv2_2802_5_33 | 18842 | 19405 | + | TetR_N |
| pfam | HRGMv2_2802_5 | HRGMv2_2802_5_34 | 19745 | 20344 | + | DUF308 | DUF308 | DUF308 |
| TC | HRGMv2_2802_5 | HRGMv2_2802_5_35 | 20341 | 20982 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_2802_5_31
Type: CAZyme
Location: 15288 - 17468 (+)
Type: CAZyme
Location: 15288 - 17468 (+)
Gene ID: HRGMv2_2802_5_32
Type: TC
Location: 17458 - 18873 (+)
Type: TC
Location: 17458 - 18873 (+)
Gene ID: HRGMv2_2802_5_33
Type: STP
Location: 18842 - 19405 (+)
Type: STP
Location: 18842 - 19405 (+)
Gene ID: HRGMv2_2802_5_34
Type: pfam
Location: 19745 - 20344 (+)
Type: pfam
Location: 19745 - 20344 (+)
Gene ID: HRGMv2_2802_5_35
Type: TC
Location: 20341 - 20982 (+)
Type: TC
Location: 20341 - 20982 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-177
Species
CAG-177 sp000431775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.