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Cluster: HRGMv2_2802_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2802_3 HRGMv2_2802_3_43 50028 50291 - 8.A.8.1.6
TC HRGMv2_2802_3 HRGMv2_2802_3_44 50491 51192 - 3.A.1.4.10
TC HRGMv2_2802_3 HRGMv2_2802_3_45 51205 52029 - 3.A.1.4.10
TC HRGMv2_2802_3 HRGMv2_2802_3_46 52026 53135 - 3.A.1.4.8
TC HRGMv2_2802_3 HRGMv2_2802_3_47 53146 54027 - 3.A.1.4.10
pfam HRGMv2_2802_3 HRGMv2_2802_3_48 54187 55374 - ANF_receptor | Peripla_BP_5 | Peripla_BP_6
NULL(UNKNOWN) HRGMv2_2802_3 HRGMv2_2802_3_49 55517 55747 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2802_3 HRGMv2_2802_3_50 56027 57547 + GH29
Gene ID: HRGMv2_2802_3_43
Type: TC
Location: 50028 - 50291 (-)
Gene ID: HRGMv2_2802_3_44
Type: TC
Location: 50491 - 51192 (-)
Gene ID: HRGMv2_2802_3_45
Type: TC
Location: 51205 - 52029 (-)
Gene ID: HRGMv2_2802_3_46
Type: TC
Location: 52026 - 53135 (-)
Gene ID: HRGMv2_2802_3_47
Type: TC
Location: 53146 - 54027 (-)
Gene ID: HRGMv2_2802_3_48
Type: pfam
Location: 54187 - 55374 (-)
Gene ID: HRGMv2_2802_3_49
Type:
Location: 55517 - 55747 (-)
Gene ID: HRGMv2_2802_3_50
Type: CAZyme
Location: 56027 - 57547 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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