Cluster: HRGMv2_2802_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2802
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2802_77 | HRGMv2_2802_77_2 | 878 | 2467 | + | 2.A.2.3.1 |
| pfam | HRGMv2_2802_77 | HRGMv2_2802_77_3 | 2531 | 3379 | - | adh_short | adh_short_C2 |
| CAZyme | HRGMv2_2802_77 | HRGMv2_2802_77_4 | 3401 | 4411 | - | GH179 |
| CAZyme | HRGMv2_2802_77 | HRGMv2_2802_77_5 | 4422 | 6446 | - | GH177 |
| TC | HRGMv2_2802_77 | HRGMv2_2802_77_6 | 6601 | 7794 | - | 3.B.1.1.2 |
| TC | HRGMv2_2802_77 | HRGMv2_2802_77_7 | 7806 | 8048 | - | 3.B.1.1.3 |
Gene ID: HRGMv2_2802_77_2
Type: TC
Location: 878 - 2467 (+)
Type: TC
Location: 878 - 2467 (+)
Gene ID: HRGMv2_2802_77_3
Type: pfam
Location: 2531 - 3379 (-)
Type: pfam
Location: 2531 - 3379 (-)
Gene ID: HRGMv2_2802_77_4
Type: CAZyme
Location: 3401 - 4411 (-)
Type: CAZyme
Location: 3401 - 4411 (-)
Gene ID: HRGMv2_2802_77_5
Type: CAZyme
Location: 4422 - 6446 (-)
Type: CAZyme
Location: 4422 - 6446 (-)
Gene ID: HRGMv2_2802_77_6
Type: TC
Location: 6601 - 7794 (-)
Type: TC
Location: 6601 - 7794 (-)
Gene ID: HRGMv2_2802_77_7
Type: TC
Location: 7806 - 8048 (-)
Type: TC
Location: 7806 - 8048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-177
Species
CAG-177 sp000431775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2802_77_3 | vegan > omnivore | 1.18986 | 0.03196 |