Cluster: HRGMv2_2802_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2802
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2802_58 | HRGMv2_2802_58_3 | 2519 | 4231 | - | 4.C.1.1.14 |
| TF | HRGMv2_2802_58 | HRGMv2_2802_58_4 | 4495 | 5121 | + | HTH_3 |
| TC | HRGMv2_2802_58 | HRGMv2_2802_58_5 | 5245 | 6756 | + | 2.A.2.2.3 |
| pfam | HRGMv2_2802_58 | HRGMv2_2802_58_6 | 6810 | 7262 | + | C_GCAxxG_C_C |
| pfam | HRGMv2_2802_58 | HRGMv2_2802_58_7 | 7333 | 8157 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_2802_58 | HRGMv2_2802_58_8 | 8181 | 9320 | + | GH179 |
Gene ID: HRGMv2_2802_58_3
Type: TC
Location: 2519 - 4231 (-)
Type: TC
Location: 2519 - 4231 (-)
Gene ID: HRGMv2_2802_58_4
Type: TF
Location: 4495 - 5121 (+)
Type: TF
Location: 4495 - 5121 (+)
Gene ID: HRGMv2_2802_58_5
Type: TC
Location: 5245 - 6756 (+)
Type: TC
Location: 5245 - 6756 (+)
Gene ID: HRGMv2_2802_58_6
Type: pfam
Location: 6810 - 7262 (+)
Type: pfam
Location: 6810 - 7262 (+)
Gene ID: HRGMv2_2802_58_7
Type: pfam
Location: 7333 - 8157 (+)
Type: pfam
Location: 7333 - 8157 (+)
Gene ID: HRGMv2_2802_58_8
Type: CAZyme
Location: 8181 - 9320 (+)
Type: CAZyme
Location: 8181 - 9320 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-177
Species
CAG-177 sp000431775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.