Cluster: HRGMv2_2802_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2802
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2802_44 | HRGMv2_2802_44_6 | 4915 | 7296 | + | CBM13 |
| pfam | HRGMv2_2802_44 | HRGMv2_2802_44_7 | 7307 | 8176 | + | DUF4474 |
| CAZyme | HRGMv2_2802_44 | HRGMv2_2802_44_8 | 8332 | 9345 | - | GH177 |
| TF | HRGMv2_2802_44 | HRGMv2_2802_44_9 | 9435 | 9680 | - | HTH_psq |
| TC | HRGMv2_2802_44 | HRGMv2_2802_44_10 | 9787 | 10764 | - | 3.A.1.2.17 |
| TC | HRGMv2_2802_44 | HRGMv2_2802_44_11 | 10764 | 11876 | - | 3.A.1.2.12 |
| TC | HRGMv2_2802_44 | HRGMv2_2802_44_12 | 11860 | 13407 | - | 3.A.1.2.12 |
Gene ID: HRGMv2_2802_44_6
Type: CAZyme
Location: 4915 - 7296 (+)
Type: CAZyme
Location: 4915 - 7296 (+)
Gene ID: HRGMv2_2802_44_7
Type: pfam
Location: 7307 - 8176 (+)
Type: pfam
Location: 7307 - 8176 (+)
Gene ID: HRGMv2_2802_44_8
Type: CAZyme
Location: 8332 - 9345 (-)
Type: CAZyme
Location: 8332 - 9345 (-)
Gene ID: HRGMv2_2802_44_9
Type: TF
Location: 9435 - 9680 (-)
Type: TF
Location: 9435 - 9680 (-)
Gene ID: HRGMv2_2802_44_10
Type: TC
Location: 9787 - 10764 (-)
Type: TC
Location: 9787 - 10764 (-)
Gene ID: HRGMv2_2802_44_11
Type: TC
Location: 10764 - 11876 (-)
Type: TC
Location: 10764 - 11876 (-)
Gene ID: HRGMv2_2802_44_12
Type: TC
Location: 11860 - 13407 (-)
Type: TC
Location: 11860 - 13407 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-177
Species
CAG-177 sp000431775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.