Cluster: HRGMv2_2802_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2802
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2802_1 | HRGMv2_2802_1_12 | 13785 | 16877 | + | GH106 |
| TC | HRGMv2_2802_1 | HRGMv2_2802_1_13 | 16896 | 18620 | + | 3.A.1.135.5 |
| TC | HRGMv2_2802_1 | HRGMv2_2802_1_14 | 18617 | 20371 | + | 3.A.1.135.5 |
| NULL(UNKNOWN) | HRGMv2_2802_1 | HRGMv2_2802_1_15 | 20373 | 20942 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2802_1 | HRGMv2_2802_1_16 | 21124 | 21978 | + | HTH_AraC |
| TC | HRGMv2_2802_1 | HRGMv2_2802_1_17 | 22511 | 24955 | - | 3.A.9.1.2 |
Gene ID: HRGMv2_2802_1_12
Type: CAZyme
Location: 13785 - 16877 (+)
Type: CAZyme
Location: 13785 - 16877 (+)
Gene ID: HRGMv2_2802_1_13
Type: TC
Location: 16896 - 18620 (+)
Type: TC
Location: 16896 - 18620 (+)
Gene ID: HRGMv2_2802_1_14
Type: TC
Location: 18617 - 20371 (+)
Type: TC
Location: 18617 - 20371 (+)
Gene ID: HRGMv2_2802_1_15
Type:
Location: 20373 - 20942 (+)
Type:
Location: 20373 - 20942 (+)
Gene ID: HRGMv2_2802_1_16
Type: TF
Location: 21124 - 21978 (+)
Type: TF
Location: 21124 - 21978 (+)
Gene ID: HRGMv2_2802_1_17
Type: TC
Location: 22511 - 24955 (-)
Type: TC
Location: 22511 - 24955 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-177
Species
CAG-177 sp000431775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.