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Cluster: HRGMv2_2802_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2802_26 HRGMv2_2802_26_10 13397 14695 - GH27
pfam HRGMv2_2802_26 HRGMv2_2802_26_11 14688 15518 - Methyltransf_11 | Methyltransf_25 | Methyltransf_31 | Zn_ribbon_RlmA
STP HRGMv2_2802_26 HRGMv2_2802_26_12 15582 16766 - Pribosyltran
TC HRGMv2_2802_26 HRGMv2_2802_26_13 16909 18078 - 2.A.4.7.6
TC HRGMv2_2802_26 HRGMv2_2802_26_14 18083 18937 - 1.A.23.2.2
NULL(UNKNOWN) HRGMv2_2802_26 HRGMv2_2802_26_15 19147 19455 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2802_26 HRGMv2_2802_26_16 19500 21512 + 3.A.2.2.2
TC HRGMv2_2802_26 HRGMv2_2802_26_17 21505 21990 + 3.A.2.2.2
Gene ID: HRGMv2_2802_26_10
Type: CAZyme
Location: 13397 - 14695 (-)
Gene ID: HRGMv2_2802_26_11
Type: pfam
Location: 14688 - 15518 (-)
Gene ID: HRGMv2_2802_26_12
Type: STP
Location: 15582 - 16766 (-)
Gene ID: HRGMv2_2802_26_13
Type: TC
Location: 16909 - 18078 (-)
Gene ID: HRGMv2_2802_26_14
Type: TC
Location: 18083 - 18937 (-)
Gene ID: HRGMv2_2802_26_15
Type:
Location: 19147 - 19455 (+)
Gene ID: HRGMv2_2802_26_16
Type: TC
Location: 19500 - 21512 (+)
Gene ID: HRGMv2_2802_26_17
Type: TC
Location: 21505 - 21990 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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