dbCAN Logo

Cluster: HRGMv2_2802_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2802_22 HRGMv2_2802_22_1 1 945 - 3.A.1.1.22
TC HRGMv2_2802_22 HRGMv2_2802_22_2 958 1800 - 3.A.1.1.45
TC HRGMv2_2802_22 HRGMv2_2802_22_3 1797 2651 - 3.A.1.1.45
TC HRGMv2_2802_22 HRGMv2_2802_22_4 2664 4031 - 3.A.1.1.45
CAZyme HRGMv2_2802_22 HRGMv2_2802_22_5 4167 5111 - GT2
sulfatase HRGMv2_2802_22 HRGMv2_2802_22_6 5128 6273 - S1_2
CAZyme HRGMv2_2802_22 HRGMv2_2802_22_7 6530 7813 - GH4
pfam HRGMv2_2802_22 HRGMv2_2802_22_8 7850 8791 - BcrAD_BadFG
CAZyme HRGMv2_2802_22 HRGMv2_2802_22_9 8802 10064 - GH109
NULL(UNKNOWN) HRGMv2_2802_22 HRGMv2_2802_22_10 10128 10661 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2802_22 HRGMv2_2802_22_11 10676 11254 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2802_22 HRGMv2_2802_22_12 11266 12159 - 1.E.12.1.3
pfam HRGMv2_2802_22 HRGMv2_2802_22_13 12392 13105 - DNA_alkylation
TC HRGMv2_2802_22 HRGMv2_2802_22_14 13044 14426 - 2.A.25.1.4
Gene ID: HRGMv2_2802_22_1
Type: TC
Location: 1 - 945 (-)
Gene ID: HRGMv2_2802_22_2
Type: TC
Location: 958 - 1800 (-)
Gene ID: HRGMv2_2802_22_3
Type: TC
Location: 1797 - 2651 (-)
Gene ID: HRGMv2_2802_22_4
Type: TC
Location: 2664 - 4031 (-)
Gene ID: HRGMv2_2802_22_5
Type: CAZyme
Location: 4167 - 5111 (-)
Gene ID: HRGMv2_2802_22_6
Type: sulfatase
Location: 5128 - 6273 (-)
Gene ID: HRGMv2_2802_22_7
Type: CAZyme
Location: 6530 - 7813 (-)
Gene ID: HRGMv2_2802_22_8
Type: pfam
Location: 7850 - 8791 (-)
Gene ID: HRGMv2_2802_22_9
Type: CAZyme
Location: 8802 - 10064 (-)
Gene ID: HRGMv2_2802_22_10
Type:
Location: 10128 - 10661 (-)
Gene ID: HRGMv2_2802_22_11
Type:
Location: 10676 - 11254 (-)
Gene ID: HRGMv2_2802_22_12
Type: TC
Location: 11266 - 12159 (-)
Gene ID: HRGMv2_2802_22_13
Type: pfam
Location: 12392 - 13105 (-)
Gene ID: HRGMv2_2802_22_14
Type: TC
Location: 13044 - 14426 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List