Cluster: HRGMv2_2802_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2802
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2802_17 | HRGMv2_2802_17_30 | 24419 | 26881 | + | GH38 |
| pfam | HRGMv2_2802_17 | HRGMv2_2802_17_31 | 26921 | 27544 | - | PRK | AAA_18 |
| TC | HRGMv2_2802_17 | HRGMv2_2802_17_32 | 27693 | 28877 | + | 3.A.1.2.10 |
| TC | HRGMv2_2802_17 | HRGMv2_2802_17_33 | 29016 | 30566 | + | 3.A.1.2.17 |
| TC | HRGMv2_2802_17 | HRGMv2_2802_17_34 | 30559 | 31806 | + | 3.A.1.2.10 |
| TC | HRGMv2_2802_17 | HRGMv2_2802_17_35 | 31803 | 32807 | + | 3.A.1.2.17 |
Gene ID: HRGMv2_2802_17_30
Type: CAZyme
Location: 24419 - 26881 (+)
Type: CAZyme
Location: 24419 - 26881 (+)
Gene ID: HRGMv2_2802_17_31
Type: pfam
Location: 26921 - 27544 (-)
Type: pfam
Location: 26921 - 27544 (-)
Gene ID: HRGMv2_2802_17_32
Type: TC
Location: 27693 - 28877 (+)
Type: TC
Location: 27693 - 28877 (+)
Gene ID: HRGMv2_2802_17_33
Type: TC
Location: 29016 - 30566 (+)
Type: TC
Location: 29016 - 30566 (+)
Gene ID: HRGMv2_2802_17_34
Type: TC
Location: 30559 - 31806 (+)
Type: TC
Location: 30559 - 31806 (+)
Gene ID: HRGMv2_2802_17_35
Type: TC
Location: 31803 - 32807 (+)
Type: TC
Location: 31803 - 32807 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-177
Species
CAG-177 sp000431775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.