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Cluster: HRGMv2_2802_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2802_10 HRGMv2_2802_10_29 34133 36313 - GH36
CAZyme HRGMv2_2802_10 HRGMv2_2802_10_30 36315 37934 - GH123
pfam HRGMv2_2802_10 HRGMv2_2802_10_31 37953 38759 - F420_oxidored | P5CR_dimer
pfam HRGMv2_2802_10 HRGMv2_2802_10_32 38792 40831 - GH123_cat
TC HRGMv2_2802_10 HRGMv2_2802_10_33 40962 41426 - 1.A.22.1.4
pfam HRGMv2_2802_10 HRGMv2_2802_10_34 41486 42403 - Radical_SAM | Fer4_12
pfam HRGMv2_2802_10 HRGMv2_2802_10_35 42535 43305 + Pan_kinase
TC HRGMv2_2802_10 HRGMv2_2802_10_36 43320 44240 + 2.A.7.7.2
Gene ID: HRGMv2_2802_10_29
Type: CAZyme
Location: 34133 - 36313 (-)
Gene ID: HRGMv2_2802_10_30
Type: CAZyme
Location: 36315 - 37934 (-)
Gene ID: HRGMv2_2802_10_31
Type: pfam
Location: 37953 - 38759 (-)
Gene ID: HRGMv2_2802_10_32
Type: pfam
Location: 38792 - 40831 (-)
Gene ID: HRGMv2_2802_10_33
Type: TC
Location: 40962 - 41426 (-)
Gene ID: HRGMv2_2802_10_34
Type: pfam
Location: 41486 - 42403 (-)
Gene ID: HRGMv2_2802_10_35
Type: pfam
Location: 42535 - 43305 (+)
Gene ID: HRGMv2_2802_10_36
Type: TC
Location: 43320 - 44240 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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