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Cluster: HRGMv2_2802_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2802_9 HRGMv2_2802_9_41 44548 46011 + 2.A.2.3.5
pfam HRGMv2_2802_9 HRGMv2_2802_9_42 46011 46898 + PseudoU_synth_2
TC HRGMv2_2802_9 HRGMv2_2802_9_43 47016 47936 + 3.A.1.3.17
TC HRGMv2_2802_9 HRGMv2_2802_9_44 48032 48754 + 3.A.1.3.15
TC HRGMv2_2802_9 HRGMv2_2802_9_45 48738 49532 + 3.A.1.3.25
NULL(UNKNOWN) HRGMv2_2802_9 HRGMv2_2802_9_46 49665 50957 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2802_9 HRGMv2_2802_9_47 51300 52367 - GH179
CAZyme HRGMv2_2802_9 HRGMv2_2802_9_48 52387 53667 - GH125
Gene ID: HRGMv2_2802_9_41
Type: TC
Location: 44548 - 46011 (+)
Gene ID: HRGMv2_2802_9_42
Type: pfam
Location: 46011 - 46898 (+)
Gene ID: HRGMv2_2802_9_43
Type: TC
Location: 47016 - 47936 (+)
Gene ID: HRGMv2_2802_9_44
Type: TC
Location: 48032 - 48754 (+)
Gene ID: HRGMv2_2802_9_45
Type: TC
Location: 48738 - 49532 (+)
Gene ID: HRGMv2_2802_9_46
Type:
Location: 49665 - 50957 (+)
Gene ID: HRGMv2_2802_9_47
Type: CAZyme
Location: 51300 - 52367 (-)
Gene ID: HRGMv2_2802_9_48
Type: CAZyme
Location: 52387 - 53667 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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