Cluster: HRGMv2_2799_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2799
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2799_17 | HRGMv2_2799_17_26 | 42764 | 43936 | + | 3.A.1.1.22 |
| TC | HRGMv2_2799_17 | HRGMv2_2799_17_27 | 44113 | 45483 | + | 3.A.1.1.45 |
| TC | HRGMv2_2799_17 | HRGMv2_2799_17_28 | 45628 | 46956 | + | 3.A.1.1.45 |
| TC | HRGMv2_2799_17 | HRGMv2_2799_17_29 | 46953 | 47807 | + | 3.A.1.1.45 |
| TF | HRGMv2_2799_17 | HRGMv2_2799_17_30 | 47810 | 48811 | + | LacI |
| CAZyme | HRGMv2_2799_17 | HRGMv2_2799_17_31 | 48832 | 50307 | + | GH77 |
Gene ID: HRGMv2_2799_17_26
Type: TC
Location: 42764 - 43936 (+)
Type: TC
Location: 42764 - 43936 (+)
Gene ID: HRGMv2_2799_17_27
Type: TC
Location: 44113 - 45483 (+)
Type: TC
Location: 44113 - 45483 (+)
Gene ID: HRGMv2_2799_17_28
Type: TC
Location: 45628 - 46956 (+)
Type: TC
Location: 45628 - 46956 (+)
Gene ID: HRGMv2_2799_17_29
Type: TC
Location: 46953 - 47807 (+)
Type: TC
Location: 46953 - 47807 (+)
Gene ID: HRGMv2_2799_17_30
Type: TF
Location: 47810 - 48811 (+)
Type: TF
Location: 47810 - 48811 (+)
Gene ID: HRGMv2_2799_17_31
Type: CAZyme
Location: 48832 - 50307 (+)
Type: CAZyme
Location: 48832 - 50307 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900546415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2799_17_29 | vegetarian > vegan | 1.26329 | 0.00290 |