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Cluster: HRGMv2_2799_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2799_12 HRGMv2_2799_12_15 13314 15587 - 3.A.9.1.2
pfam HRGMv2_2799_12 HRGMv2_2799_12_16 15612 16721 - DUF5711
pfam HRGMv2_2799_12 HRGMv2_2799_12_17 16711 17475 - PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_2799_12 HRGMv2_2799_12_18 17502 18305 - 3.A.1.25.4
TC HRGMv2_2799_12 HRGMv2_2799_12_19 18299 19165 - 3.A.1.26.9
TC HRGMv2_2799_12 HRGMv2_2799_12_20 19187 20032 - 3.A.1.26.7
pfam HRGMv2_2799_12 HRGMv2_2799_12_21 20043 20903 - Cons_hypoth95 | Methyltrans_SAM
CAZyme HRGMv2_2799_12 HRGMv2_2799_12_22 20947 23526 - GT51
Gene ID: HRGMv2_2799_12_15
Type: TC
Location: 13314 - 15587 (-)
Gene ID: HRGMv2_2799_12_16
Type: pfam
Location: 15612 - 16721 (-)
Gene ID: HRGMv2_2799_12_17
Type: pfam
Location: 16711 - 17475 (-)
Gene ID: HRGMv2_2799_12_18
Type: TC
Location: 17502 - 18305 (-)
Gene ID: HRGMv2_2799_12_19
Type: TC
Location: 18299 - 19165 (-)
Gene ID: HRGMv2_2799_12_20
Type: TC
Location: 19187 - 20032 (-)
Gene ID: HRGMv2_2799_12_21
Type: pfam
Location: 20043 - 20903 (-)
Gene ID: HRGMv2_2799_12_22
Type: CAZyme
Location: 20947 - 23526 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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