Cluster: HRGMv2_2799_CGC11
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2799
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2799_11 | HRGMv2_2799_11_32 | 47800 | 49482 | - | GH13_31 |
| TC | HRGMv2_2799_11 | HRGMv2_2799_11_33 | 49763 | 51139 | + | 2.A.2.2.1 |
| peptidase | HRGMv2_2799_11 | HRGMv2_2799_11_34 | 51530 | 52504 | + | C59.UPW |
| pfam | HRGMv2_2799_11 | HRGMv2_2799_11_35 | 52782 | 54155 | - | Transpeptidase |
| TC | HRGMv2_2799_11 | HRGMv2_2799_11_36 | 54148 | 55890 | - | 2.A.103.1.3 |
| pfam | HRGMv2_2799_11 | HRGMv2_2799_11_37 | 55908 | 57221 | - | AI-2E_transport |
| TC | HRGMv2_2799_11 | HRGMv2_2799_11_38 | 57331 | 58590 | - | 3.A.1.122.2 |
| pfam | HRGMv2_2799_11 | HRGMv2_2799_11_39 | 58603 | 60171 | - | Biotin_lipoyl_2 |
| TC | HRGMv2_2799_11 | HRGMv2_2799_11_40 | 60164 | 60940 | - | 3.A.1.122.2 |
| pfam | HRGMv2_2799_11 | HRGMv2_2799_11_41 | 60940 | 62352 | - | Biotin_lipoyl_2 |
| TC | HRGMv2_2799_11 | HRGMv2_2799_11_42 | 62461 | 63276 | - | 3.A.1.132.3 |
| TC | HRGMv2_2799_11 | HRGMv2_2799_11_43 | 63319 | 65190 | - | 3.A.1.121.4 |
| pfam | HRGMv2_2799_11 | HRGMv2_2799_11_44 | 65212 | 65790 | - | DUF4093 |
| pfam | HRGMv2_2799_11 | HRGMv2_2799_11_45 | 65783 | 66826 | - | DNA_pol3_delta | DNA_pol3_delta_C |
| TC | HRGMv2_2799_11 | HRGMv2_2799_11_46 | 66832 | 69072 | - | 3.A.11.1.3 |
Gene ID: HRGMv2_2799_11_32
Type: CAZyme
Location: 47800 - 49482 (-)
Type: CAZyme
Location: 47800 - 49482 (-)
Gene ID: HRGMv2_2799_11_33
Type: TC
Location: 49763 - 51139 (+)
Type: TC
Location: 49763 - 51139 (+)
Gene ID: HRGMv2_2799_11_34
Type: peptidase
Location: 51530 - 52504 (+)
Type: peptidase
Location: 51530 - 52504 (+)
Gene ID: HRGMv2_2799_11_35
Type: pfam
Location: 52782 - 54155 (-)
Type: pfam
Location: 52782 - 54155 (-)
Gene ID: HRGMv2_2799_11_36
Type: TC
Location: 54148 - 55890 (-)
Type: TC
Location: 54148 - 55890 (-)
Gene ID: HRGMv2_2799_11_37
Type: pfam
Location: 55908 - 57221 (-)
Type: pfam
Location: 55908 - 57221 (-)
Gene ID: HRGMv2_2799_11_38
Type: TC
Location: 57331 - 58590 (-)
Type: TC
Location: 57331 - 58590 (-)
Gene ID: HRGMv2_2799_11_39
Type: pfam
Location: 58603 - 60171 (-)
Type: pfam
Location: 58603 - 60171 (-)
Gene ID: HRGMv2_2799_11_40
Type: TC
Location: 60164 - 60940 (-)
Type: TC
Location: 60164 - 60940 (-)
Gene ID: HRGMv2_2799_11_41
Type: pfam
Location: 60940 - 62352 (-)
Type: pfam
Location: 60940 - 62352 (-)
Gene ID: HRGMv2_2799_11_42
Type: TC
Location: 62461 - 63276 (-)
Type: TC
Location: 62461 - 63276 (-)
Gene ID: HRGMv2_2799_11_43
Type: TC
Location: 63319 - 65190 (-)
Type: TC
Location: 63319 - 65190 (-)
Gene ID: HRGMv2_2799_11_44
Type: pfam
Location: 65212 - 65790 (-)
Type: pfam
Location: 65212 - 65790 (-)
Gene ID: HRGMv2_2799_11_45
Type: pfam
Location: 65783 - 66826 (-)
Type: pfam
Location: 65783 - 66826 (-)
Gene ID: HRGMv2_2799_11_46
Type: TC
Location: 66832 - 69072 (-)
Type: TC
Location: 66832 - 69072 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900546415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.