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Cluster: HRGMv2_2799_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2799_1 HRGMv2_2799_1_108 114527 115648 - 9.B.102.1.14
pfam HRGMv2_2799_1 HRGMv2_2799_1_109 115732 115998 + rve_2 | rve_3
TC HRGMv2_2799_1 HRGMv2_2799_1_110 116086 117462 - 1.A.26.1.2
CAZyme HRGMv2_2799_1 HRGMv2_2799_1_111 117918 119813 + CBM48 | GH13_9
pfam HRGMv2_2799_1 HRGMv2_2799_1_112 119846 121033 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2799_1 HRGMv2_2799_1_113 121057 122175 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2799_1 HRGMv2_2799_1_114 122172 123602 + GT5
CAZyme HRGMv2_2799_1 HRGMv2_2799_1_115 123654 126080 + GT35
CAZyme HRGMv2_2799_1 HRGMv2_2799_1_116 126084 127931 + GH13_39
NULL(UNKNOWN) HRGMv2_2799_1 HRGMv2_2799_1_117 128213 128749 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2799_1 HRGMv2_2799_1_118 128808 131117 + SBP_bac_5
TC HRGMv2_2799_1 HRGMv2_2799_1_119 131222 132211 + 3.A.1.5.20
TC HRGMv2_2799_1 HRGMv2_2799_1_120 132223 134274 + 3.A.1.5.20
TC HRGMv2_2799_1 HRGMv2_2799_1_121 134287 135498 + 3.A.1.5.12
TC HRGMv2_2799_1 HRGMv2_2799_1_122 135491 136612 + 3.A.1.5.20
Gene ID: HRGMv2_2799_1_108
Type: TC
Location: 114527 - 115648 (-)
Gene ID: HRGMv2_2799_1_109
Type: pfam
Location: 115732 - 115998 (+)
Gene ID: HRGMv2_2799_1_110
Type: TC
Location: 116086 - 117462 (-)
Gene ID: HRGMv2_2799_1_111
Type: CAZyme
Location: 117918 - 119813 (+)
Gene ID: HRGMv2_2799_1_112
Type: pfam
Location: 119846 - 121033 (+)
Gene ID: HRGMv2_2799_1_113
Type: pfam
Location: 121057 - 122175 (+)
Gene ID: HRGMv2_2799_1_114
Type: CAZyme
Location: 122172 - 123602 (+)
Gene ID: HRGMv2_2799_1_115
Type: CAZyme
Location: 123654 - 126080 (+)
Gene ID: HRGMv2_2799_1_116
Type: CAZyme
Location: 126084 - 127931 (+)
Gene ID: HRGMv2_2799_1_117
Type:
Location: 128213 - 128749 (+)
Gene ID: HRGMv2_2799_1_118
Type: STP
Location: 128808 - 131117 (+)
Gene ID: HRGMv2_2799_1_119
Type: TC
Location: 131222 - 132211 (+)
Gene ID: HRGMv2_2799_1_120
Type: TC
Location: 132223 - 134274 (+)
Gene ID: HRGMv2_2799_1_121
Type: TC
Location: 134287 - 135498 (+)
Gene ID: HRGMv2_2799_1_122
Type: TC
Location: 135491 - 136612 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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