Cluster: HRGMv2_2798_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2798
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2798_48 | HRGMv2_2798_48_2 | 2047 | 3438 | - | 9.B.160.1.10 |
| STP | HRGMv2_2798_48 | HRGMv2_2798_48_3 | 3556 | 4989 | - | HATPase_c | HisKA |
| TF | HRGMv2_2798_48 | HRGMv2_2798_48_4 | 4986 | 5681 | - | Trans_reg_C |
| CAZyme | HRGMv2_2798_48 | HRGMv2_2798_48_5 | 5892 | 7988 | + | GH3 |
Gene ID: HRGMv2_2798_48_2
Type: TC
Location: 2047 - 3438 (-)
Type: TC
Location: 2047 - 3438 (-)
Gene ID: HRGMv2_2798_48_3
Type: STP
Location: 3556 - 4989 (-)
Type: STP
Location: 3556 - 4989 (-)
Gene ID: HRGMv2_2798_48_4
Type: TF
Location: 4986 - 5681 (-)
Type: TF
Location: 4986 - 5681 (-)
Gene ID: HRGMv2_2798_48_5
Type: CAZyme
Location: 5892 - 7988 (+)
Type: CAZyme
Location: 5892 - 7988 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp003516765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2798_48_5 | vegetarian > vegan | 1.27951 | 0.00016 |