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Cluster: HRGMv2_2798_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2798_36 HRGMv2_2798_36_6 4397 6751 - 3.A.9.1.2
pfam HRGMv2_2798_36 HRGMv2_2798_36_7 6872 8035 - DUF5711
pfam HRGMv2_2798_36 HRGMv2_2798_36_8 8025 8789 - PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_2798_36 HRGMv2_2798_36_9 8815 9618 - 3.A.1.25.4
TC HRGMv2_2798_36 HRGMv2_2798_36_10 9612 10481 - 3.A.1.26.7
TC HRGMv2_2798_36 HRGMv2_2798_36_11 10499 11353 - 3.A.1.26.7
pfam HRGMv2_2798_36 HRGMv2_2798_36_12 11358 12221 - Methyltransf_15 | Methyltrans_SAM
CAZyme HRGMv2_2798_36 HRGMv2_2798_36_13 12239 14710 - GT51
Gene ID: HRGMv2_2798_36_6
Type: TC
Location: 4397 - 6751 (-)
Gene ID: HRGMv2_2798_36_7
Type: pfam
Location: 6872 - 8035 (-)
Gene ID: HRGMv2_2798_36_8
Type: pfam
Location: 8025 - 8789 (-)
Gene ID: HRGMv2_2798_36_9
Type: TC
Location: 8815 - 9618 (-)
Gene ID: HRGMv2_2798_36_10
Type: TC
Location: 9612 - 10481 (-)
Gene ID: HRGMv2_2798_36_11
Type: TC
Location: 10499 - 11353 (-)
Gene ID: HRGMv2_2798_36_12
Type: pfam
Location: 11358 - 12221 (-)
Gene ID: HRGMv2_2798_36_13
Type: CAZyme
Location: 12239 - 14710 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2798_36_8 vegetarian > vegan 1.06153 0.00016

🧭 Explore Read Mapping of CGC

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