Cluster: HRGMv2_2798_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2798
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2798_22 | HRGMv2_2798_22_24 | 23877 | 24581 | + | 3.A.1.132.6 |
| NULL(UNKNOWN) | HRGMv2_2798_22 | HRGMv2_2798_22_25 | 24566 | 25372 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2798_22 | HRGMv2_2798_22_26 | 25515 | 26708 | - | CE4 |
| TF | HRGMv2_2798_22 | HRGMv2_2798_22_27 | 26705 | 27589 | - | HTH_3 |
| STP | HRGMv2_2798_22 | HRGMv2_2798_22_28 | 27700 | 28257 | - | Pribosyltran |
| TC | HRGMv2_2798_22 | HRGMv2_2798_22_29 | 28584 | 29564 | + | 2.A.40.7.4 |
Gene ID: HRGMv2_2798_22_24
Type: TC
Location: 23877 - 24581 (+)
Type: TC
Location: 23877 - 24581 (+)
Gene ID: HRGMv2_2798_22_25
Type:
Location: 24566 - 25372 (+)
Type:
Location: 24566 - 25372 (+)
Gene ID: HRGMv2_2798_22_26
Type: CAZyme
Location: 25515 - 26708 (-)
Type: CAZyme
Location: 25515 - 26708 (-)
Gene ID: HRGMv2_2798_22_27
Type: TF
Location: 26705 - 27589 (-)
Type: TF
Location: 26705 - 27589 (-)
Gene ID: HRGMv2_2798_22_28
Type: STP
Location: 27700 - 28257 (-)
Type: STP
Location: 27700 - 28257 (-)
Gene ID: HRGMv2_2798_22_29
Type: TC
Location: 28584 - 29564 (+)
Type: TC
Location: 28584 - 29564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp003516765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2798_22_27 | vegetarian > vegan | 1.65204 | 0.00016 |