Cluster: HRGMv2_2798_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2798
- CGC Family ID: CGCFAM_00802
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2798_2 | HRGMv2_2798_2_19 | 20058 | 21353 | + | GT4 |
| pfam | HRGMv2_2798_2 | HRGMv2_2798_2_20 | 21636 | 25208 | + | SMC_N | SMC_hinge | AAA_15 | AAA_23 |
| TC | HRGMv2_2798_2 | HRGMv2_2798_2_21 | 25227 | 26117 | + | 3.A.5.1.1 |
Gene ID: HRGMv2_2798_2_19
Type: CAZyme
Location: 20058 - 21353 (+)
Type: CAZyme
Location: 20058 - 21353 (+)
Gene ID: HRGMv2_2798_2_20
Type: pfam
Location: 21636 - 25208 (+)
Type: pfam
Location: 21636 - 25208 (+)
Gene ID: HRGMv2_2798_2_21
Type: TC
Location: 25227 - 26117 (+)
Type: TC
Location: 25227 - 26117 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp003516765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2798_2_19 | vegetarian > vegan | 1.26439 | 0.00016 |