Cluster: HRGMv2_2791_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2791
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2791_13 | HRGMv2_2791_13_20 | 18429 | 19181 | + | 3.A.1.1.38 |
| pfam | HRGMv2_2791_13 | HRGMv2_2791_13_21 | 19194 | 20798 | + | BPD_transp_1 | BPD_transp_1 |
| TF | HRGMv2_2791_13 | HRGMv2_2791_13_22 | 20801 | 21685 | + | MarR |
| CAZyme | HRGMv2_2791_13 | HRGMv2_2791_13_23 | 21761 | 23797 | - | GH31_14 |
| CAZyme | HRGMv2_2791_13 | HRGMv2_2791_13_24 | 23846 | 25234 | - | CE20 |
| CAZyme | HRGMv2_2791_13 | HRGMv2_2791_13_25 | 25490 | 26992 | + | GH32 |
Gene ID: HRGMv2_2791_13_20
Type: TC
Location: 18429 - 19181 (+)
Type: TC
Location: 18429 - 19181 (+)
Gene ID: HRGMv2_2791_13_21
Type: pfam
Location: 19194 - 20798 (+)
Type: pfam
Location: 19194 - 20798 (+)
Gene ID: HRGMv2_2791_13_22
Type: TF
Location: 20801 - 21685 (+)
Type: TF
Location: 20801 - 21685 (+)
Gene ID: HRGMv2_2791_13_23
Type: CAZyme
Location: 21761 - 23797 (-)
Type: CAZyme
Location: 21761 - 23797 (-)
Gene ID: HRGMv2_2791_13_24
Type: CAZyme
Location: 23846 - 25234 (-)
Type: CAZyme
Location: 23846 - 25234 (-)
Gene ID: HRGMv2_2791_13_25
Type: CAZyme
Location: 25490 - 26992 (+)
Type: CAZyme
Location: 25490 - 26992 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-272
Species
CAG-272 sp000433515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.