Cluster: HRGMv2_2791_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2791
- CGC Family ID: CGCFAM_10183
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2791_3 | HRGMv2_2791_3_27 | 30504 | 33188 | + | 9.B.144.1.5 |
| TC | HRGMv2_2791_3 | HRGMv2_2791_3_28 | 33275 | 34216 | + | 3.A.11.1.4 |
| CAZyme | HRGMv2_2791_3 | HRGMv2_2791_3_29 | 34194 | 34904 | - | CE4 |
| CAZyme | HRGMv2_2791_3 | HRGMv2_2791_3_30 | 34882 | 35685 | - | CE4 |
| NULL(UNKNOWN) | HRGMv2_2791_3 | HRGMv2_2791_3_31 | 35833 | 37872 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2791_3 | HRGMv2_2791_3_32 | 38035 | 38376 | + | Ribosomal_L19 |
| TC | HRGMv2_2791_3 | HRGMv2_2791_3_33 | 38442 | 39002 | - | 3.A.1.25.5 |
Gene ID: HRGMv2_2791_3_27
Type: TC
Location: 30504 - 33188 (+)
Type: TC
Location: 30504 - 33188 (+)
Gene ID: HRGMv2_2791_3_28
Type: TC
Location: 33275 - 34216 (+)
Type: TC
Location: 33275 - 34216 (+)
Gene ID: HRGMv2_2791_3_29
Type: CAZyme
Location: 34194 - 34904 (-)
Type: CAZyme
Location: 34194 - 34904 (-)
Gene ID: HRGMv2_2791_3_30
Type: CAZyme
Location: 34882 - 35685 (-)
Type: CAZyme
Location: 34882 - 35685 (-)
Gene ID: HRGMv2_2791_3_31
Type:
Location: 35833 - 37872 (+)
Type:
Location: 35833 - 37872 (+)
Gene ID: HRGMv2_2791_3_32
Type: pfam
Location: 38035 - 38376 (+)
Type: pfam
Location: 38035 - 38376 (+)
Gene ID: HRGMv2_2791_3_33
Type: TC
Location: 38442 - 39002 (-)
Type: TC
Location: 38442 - 39002 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-272
Species
CAG-272 sp000433515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.