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Cluster: HRGMv2_2791_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2791_45 HRGMv2_2791_45_1 168 1358 + GT4
CAZyme HRGMv2_2791_45 HRGMv2_2791_45_2 1348 2364 + GT2
CAZyme HRGMv2_2791_45 HRGMv2_2791_45_3 2372 3352 + GT2
CAZyme HRGMv2_2791_45 HRGMv2_2791_45_4 3349 4350 + GT2
CAZyme HRGMv2_2791_45 HRGMv2_2791_45_5 4343 5293 + GT2
pfam HRGMv2_2791_45 HRGMv2_2791_45_6 5290 6456 + PS_pyruv_trans
CAZyme HRGMv2_2791_45 HRGMv2_2791_45_7 6459 7484 + GT2
TC HRGMv2_2791_45 HRGMv2_2791_45_8 7465 8343 + 3.A.1.103.6
TC HRGMv2_2791_45 HRGMv2_2791_45_9 8355 9641 + 3.A.1.103.5
Gene ID: HRGMv2_2791_45_1
Type: CAZyme
Location: 168 - 1358 (+)
Gene ID: HRGMv2_2791_45_2
Type: CAZyme
Location: 1348 - 2364 (+)
Gene ID: HRGMv2_2791_45_3
Type: CAZyme
Location: 2372 - 3352 (+)
Gene ID: HRGMv2_2791_45_4
Type: CAZyme
Location: 3349 - 4350 (+)
Gene ID: HRGMv2_2791_45_5
Type: CAZyme
Location: 4343 - 5293 (+)
Gene ID: HRGMv2_2791_45_6
Type: pfam
Location: 5290 - 6456 (+)
Gene ID: HRGMv2_2791_45_7
Type: CAZyme
Location: 6459 - 7484 (+)
Gene ID: HRGMv2_2791_45_8
Type: TC
Location: 7465 - 8343 (+)
Gene ID: HRGMv2_2791_45_9
Type: TC
Location: 8355 - 9641 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-272
→
Species
CAG-272 sp000433515

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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