Cluster: HRGMv2_2791_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2791
- CGC Family ID: CGCFAM_00590
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2791_20 | HRGMv2_2791_20_23 | 19713 | 20585 | + | GH23 |
| pfam | HRGMv2_2791_20 | HRGMv2_2791_20_24 | 20695 | 21816 | - | Tubulin | FtsZ_C |
| pfam | HRGMv2_2791_20 | HRGMv2_2791_20_25 | 21963 | 22835 | - | POTRA_1 |
| CAZyme | HRGMv2_2791_20 | HRGMv2_2791_20_26 | 22905 | 24026 | - | GT28 |
| TC | HRGMv2_2791_20 | HRGMv2_2791_20_27 | 24049 | 25443 | - | 2.A.103.1.3 |
| TC | HRGMv2_2791_20 | HRGMv2_2791_20_28 | 25499 | 26506 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_2791_20_23
Type: CAZyme
Location: 19713 - 20585 (+)
Type: CAZyme
Location: 19713 - 20585 (+)
Gene ID: HRGMv2_2791_20_24
Type: pfam
Location: 20695 - 21816 (-)
Type: pfam
Location: 20695 - 21816 (-)
Gene ID: HRGMv2_2791_20_25
Type: pfam
Location: 21963 - 22835 (-)
Type: pfam
Location: 21963 - 22835 (-)
Gene ID: HRGMv2_2791_20_26
Type: CAZyme
Location: 22905 - 24026 (-)
Type: CAZyme
Location: 22905 - 24026 (-)
Gene ID: HRGMv2_2791_20_27
Type: TC
Location: 24049 - 25443 (-)
Type: TC
Location: 24049 - 25443 (-)
Gene ID: HRGMv2_2791_20_28
Type: TC
Location: 25499 - 26506 (-)
Type: TC
Location: 25499 - 26506 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-272
Species
CAG-272 sp000433515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.