Cluster: HRGMv2_2791_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2791
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2791_1 | HRGMv2_2791_1_38 | 46283 | 47695 | - | 3.A.2.1.5 |
| TC | HRGMv2_2791_1 | HRGMv2_2791_1_39 | 47713 | 48546 | - | 3.A.2.1.5 |
| TC | HRGMv2_2791_1 | HRGMv2_2791_1_40 | 48583 | 50094 | - | 3.A.2.1.5 |
| pfam | HRGMv2_2791_1 | HRGMv2_2791_1_41 | 50128 | 50667 | - | OSCP |
| pfam | HRGMv2_2791_1 | HRGMv2_2791_1_42 | 50707 | 51210 | - | ATP-synt_B |
| TC | HRGMv2_2791_1 | HRGMv2_2791_1_43 | 51245 | 51526 | - | 3.A.2.1.2 |
| TC | HRGMv2_2791_1 | HRGMv2_2791_1_44 | 51556 | 52482 | - | 3.A.2.1.2 |
| pfam | HRGMv2_2791_1 | HRGMv2_2791_1_45 | 52479 | 52889 | - | ATP-synt_I |
| NULL(UNKNOWN) | HRGMv2_2791_1 | HRGMv2_2791_1_46 | 53173 | 53598 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2791_1 | HRGMv2_2791_1_47 | 53830 | 56772 | + | 3.A.1.122.2 |
| pfam | HRGMv2_2791_1 | HRGMv2_2791_1_48 | 57240 | 58364 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| pfam | HRGMv2_2791_1 | HRGMv2_2791_1_49 | 58364 | 59026 | + | CoaE |
| CAZyme | HRGMv2_2791_1 | HRGMv2_2791_1_50 | 59020 | 59628 | + | GH23 |
Gene ID: HRGMv2_2791_1_38
Type: TC
Location: 46283 - 47695 (-)
Type: TC
Location: 46283 - 47695 (-)
Gene ID: HRGMv2_2791_1_39
Type: TC
Location: 47713 - 48546 (-)
Type: TC
Location: 47713 - 48546 (-)
Gene ID: HRGMv2_2791_1_40
Type: TC
Location: 48583 - 50094 (-)
Type: TC
Location: 48583 - 50094 (-)
Gene ID: HRGMv2_2791_1_41
Type: pfam
Location: 50128 - 50667 (-)
Type: pfam
Location: 50128 - 50667 (-)
Gene ID: HRGMv2_2791_1_42
Type: pfam
Location: 50707 - 51210 (-)
Type: pfam
Location: 50707 - 51210 (-)
Gene ID: HRGMv2_2791_1_43
Type: TC
Location: 51245 - 51526 (-)
Type: TC
Location: 51245 - 51526 (-)
Gene ID: HRGMv2_2791_1_44
Type: TC
Location: 51556 - 52482 (-)
Type: TC
Location: 51556 - 52482 (-)
Gene ID: HRGMv2_2791_1_45
Type: pfam
Location: 52479 - 52889 (-)
Type: pfam
Location: 52479 - 52889 (-)
Gene ID: HRGMv2_2791_1_46
Type:
Location: 53173 - 53598 (-)
Type:
Location: 53173 - 53598 (-)
Gene ID: HRGMv2_2791_1_47
Type: TC
Location: 53830 - 56772 (+)
Type: TC
Location: 53830 - 56772 (+)
Gene ID: HRGMv2_2791_1_48
Type: pfam
Location: 57240 - 58364 (+)
Type: pfam
Location: 57240 - 58364 (+)
Gene ID: HRGMv2_2791_1_49
Type: pfam
Location: 58364 - 59026 (+)
Type: pfam
Location: 58364 - 59026 (+)
Gene ID: HRGMv2_2791_1_50
Type: CAZyme
Location: 59020 - 59628 (+)
Type: CAZyme
Location: 59020 - 59628 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-272
Species
CAG-272 sp000433515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.