Cluster: HRGMv2_2779_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2779
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2779_12 | HRGMv2_2779_12_38 | 46932 | 48737 | + | 2.A.58.2.2 |
| CAZyme | HRGMv2_2779_12 | HRGMv2_2779_12_39 | 48993 | 50936 | + | CE3 |
| TC | HRGMv2_2779_12 | HRGMv2_2779_12_40 | 51069 | 51413 | + | 9.A.24.1.7 |
Gene ID: HRGMv2_2779_12_38
Type: TC
Location: 46932 - 48737 (+)
Type: TC
Location: 46932 - 48737 (+)
Gene ID: HRGMv2_2779_12_39
Type: CAZyme
Location: 48993 - 50936 (+)
Type: CAZyme
Location: 48993 - 50936 (+)
Gene ID: HRGMv2_2779_12_40
Type: TC
Location: 51069 - 51413 (+)
Type: TC
Location: 51069 - 51413 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2779_12_38 | vegan > omnivore | 1.24644 | 0.00193 |