Cluster: HRGMv2_2779_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2779
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2779_8 | HRGMv2_2779_8_15 | 17614 | 18657 | + | 9.B.146.1.3 |
| TC | HRGMv2_2779_8 | HRGMv2_2779_8_16 | 18710 | 20035 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2779_8 | HRGMv2_2779_8_17 | 20078 | 21295 | + | GT28 |
Gene ID: HRGMv2_2779_8_15
Type: TC
Location: 17614 - 18657 (+)
Type: TC
Location: 17614 - 18657 (+)
Gene ID: HRGMv2_2779_8_16
Type: TC
Location: 18710 - 20035 (+)
Type: TC
Location: 18710 - 20035 (+)
Gene ID: HRGMv2_2779_8_17
Type: CAZyme
Location: 20078 - 21295 (+)
Type: CAZyme
Location: 20078 - 21295 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.