Cluster: HRGMv2_2779_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2779
- CGC Family ID: CGCFAM_01181
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2779_115 | HRGMv2_2779_115_2 | 453 | 2477 | + | CE1 |
| peptidase | HRGMv2_2779_115 | HRGMv2_2779_115_3 | 2602 | 3573 | + | S09.UPA |
| TC | HRGMv2_2779_115 | HRGMv2_2779_115_4 | 3615 | 4616 | + | 8.A.5.1.6 |
Gene ID: HRGMv2_2779_115_2
Type: CAZyme
Location: 453 - 2477 (+)
Type: CAZyme
Location: 453 - 2477 (+)
Gene ID: HRGMv2_2779_115_3
Type: peptidase
Location: 2602 - 3573 (+)
Type: peptidase
Location: 2602 - 3573 (+)
Gene ID: HRGMv2_2779_115_4
Type: TC
Location: 3615 - 4616 (+)
Type: TC
Location: 3615 - 4616 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.