Cluster: HRGMv2_2779_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2779
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2779_102 | HRGMv2_2779_102_3 | 1431 | 3212 | + | 3.A.1.21.1 |
| TC | HRGMv2_2779_102 | HRGMv2_2779_102_4 | 3209 | 4948 | + | 3.A.1.21.1 |
| CAZyme | HRGMv2_2779_102 | HRGMv2_2779_102_5 | 5027 | 6673 | - | GH3 |
Gene ID: HRGMv2_2779_102_3
Type: TC
Location: 1431 - 3212 (+)
Type: TC
Location: 1431 - 3212 (+)
Gene ID: HRGMv2_2779_102_4
Type: TC
Location: 3209 - 4948 (+)
Type: TC
Location: 3209 - 4948 (+)
Gene ID: HRGMv2_2779_102_5
Type: CAZyme
Location: 5027 - 6673 (-)
Type: CAZyme
Location: 5027 - 6673 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.