Cluster: HRGMv2_2779_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2779
- CGC Family ID: CGCFAM_07094
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2779_37 | HRGMv2_2779_37_7 | 5811 | 6821 | - | CE2 |
| NULL(UNKNOWN) | HRGMv2_2779_37 | HRGMv2_2779_37_8 | 6891 | 7067 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2779_37 | HRGMv2_2779_37_9 | 7118 | 8902 | - | CBM35 | GH26 |
| NULL(UNKNOWN) | HRGMv2_2779_37 | HRGMv2_2779_37_10 | 9331 | 9492 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2779_37 | HRGMv2_2779_37_11 | 9572 | 10954 | - | 2.A.66.1.32 |
Gene ID: HRGMv2_2779_37_7
Type: CAZyme
Location: 5811 - 6821 (-)
Type: CAZyme
Location: 5811 - 6821 (-)
Gene ID: HRGMv2_2779_37_8
Type:
Location: 6891 - 7067 (-)
Type:
Location: 6891 - 7067 (-)
Gene ID: HRGMv2_2779_37_9
Type: CAZyme
Location: 7118 - 8902 (-)
Type: CAZyme
Location: 7118 - 8902 (-)
Gene ID: HRGMv2_2779_37_10
Type:
Location: 9331 - 9492 (+)
Type:
Location: 9331 - 9492 (+)
Gene ID: HRGMv2_2779_37_11
Type: TC
Location: 9572 - 10954 (-)
Type: TC
Location: 9572 - 10954 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.