Cluster: HRGMv2_2779_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2779
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2779_1 | HRGMv2_2779_1_36 | 40935 | 43961 | - | GH2 |
| TC | HRGMv2_2779_1 | HRGMv2_2779_1_37 | 44092 | 44967 | - | 3.A.1.1.4 |
| TC | HRGMv2_2779_1 | HRGMv2_2779_1_38 | 44970 | 45878 | - | 3.A.1.1.4 |
| TC | HRGMv2_2779_1 | HRGMv2_2779_1_39 | 45995 | 47302 | - | 3.A.1.1.4 |
Gene ID: HRGMv2_2779_1_36
Type: CAZyme
Location: 40935 - 43961 (-)
Type: CAZyme
Location: 40935 - 43961 (-)
Gene ID: HRGMv2_2779_1_37
Type: TC
Location: 44092 - 44967 (-)
Type: TC
Location: 44092 - 44967 (-)
Gene ID: HRGMv2_2779_1_38
Type: TC
Location: 44970 - 45878 (-)
Type: TC
Location: 44970 - 45878 (-)
Gene ID: HRGMv2_2779_1_39
Type: TC
Location: 45995 - 47302 (-)
Type: TC
Location: 45995 - 47302 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.