Cluster: HRGMv2_2779_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2779
- CGC Family ID: CGCFAM_04667
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2779_16 | HRGMv2_2779_16_2 | 1305 | 2735 | - | 3.A.24.3.1 |
| NULL(UNKNOWN) | HRGMv2_2779_16 | HRGMv2_2779_16_3 | 2760 | 3044 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2779_16 | HRGMv2_2779_16_4 | 3193 | 5205 | - | Dockerin_1 | LRR_5 | LRR_5 | LRR_5 | LRR_5 |
| CAZyme | HRGMv2_2779_16 | HRGMv2_2779_16_5 | 5328 | 7769 | - | CBM3 | GH9 |
Gene ID: HRGMv2_2779_16_2
Type: TC
Location: 1305 - 2735 (-)
Type: TC
Location: 1305 - 2735 (-)
Gene ID: HRGMv2_2779_16_3
Type:
Location: 2760 - 3044 (-)
Type:
Location: 2760 - 3044 (-)
Gene ID: HRGMv2_2779_16_4
Type: pfam
Location: 3193 - 5205 (-)
Type: pfam
Location: 3193 - 5205 (-)
Gene ID: HRGMv2_2779_16_5
Type: CAZyme
Location: 5328 - 7769 (-)
Type: CAZyme
Location: 5328 - 7769 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.