dbCAN HGM

Cluster: HRGMv2_2779_CGC11

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2779_14	HRGMv2_2779_14_9	8007	8756	-	3.A.1.3.2
TF	HRGMv2_2779_14	HRGMv2_2779_14_10	8753	9175	-	Rrf2
CAZyme	HRGMv2_2779_14	HRGMv2_2779_14_11	9391	10812	-	GT5
pfam	HRGMv2_2779_14	HRGMv2_2779_14_12	10934	12058	-	NTP_transferase \| Hexapep_GlmU
pfam	HRGMv2_2779_14	HRGMv2_2779_14_13	12073	13275	-	NTP_transferase \| Hexapep_GlmU
CAZyme	HRGMv2_2779_14	HRGMv2_2779_14_14	13353	15344	-	CBM48 \| GH13_9
STP	HRGMv2_2779_14	HRGMv2_2779_14_15	15537	17780	-	SpoIIE
TC	HRGMv2_2779_14	HRGMv2_2779_14_16	18001	18765	-	3.A.1.3.23
TC	HRGMv2_2779_14	HRGMv2_2779_14_17	18779	19432	-	3.A.1.3.14
TC	HRGMv2_2779_14	HRGMv2_2779_14_18	19455	20270	-	3.A.1.3.1

Gene ID: HRGMv2_2779_14_9
Type: TC
Location: 8007 - 8756 (-)

Gene ID: HRGMv2_2779_14_10
Type: TF
Location: 8753 - 9175 (-)

Gene ID: HRGMv2_2779_14_11
Type: CAZyme
Location: 9391 - 10812 (-)

Gene ID: HRGMv2_2779_14_12
Type: pfam
Location: 10934 - 12058 (-)

Gene ID: HRGMv2_2779_14_13
Type: pfam
Location: 12073 - 13275 (-)

Gene ID: HRGMv2_2779_14_14
Type: CAZyme
Location: 13353 - 15344 (-)

Gene ID: HRGMv2_2779_14_15
Type: STP
Location: 15537 - 17780 (-)

Gene ID: HRGMv2_2779_14_16
Type: TC
Location: 18001 - 18765 (-)

Gene ID: HRGMv2_2779_14_17
Type: TC
Location: 18779 - 19432 (-)

Gene ID: HRGMv2_2779_14_18
Type: TC
Location: 19455 - 20270 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2779_14_9	vegan > omnivore	2.91622	0.00193
HRGMv2_2779_14_9	vegetarian > omnivore	2.45073	0.00782
HRGMv2_2779_14_11	vegetarian > omnivore	1.03592	0.02878
HRGMv2_2779_14_13	vegan > omnivore	2.13202	0.00193
HRGMv2_2779_14_13	vegetarian > omnivore	1.24758	0.01550

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2779_14_9	vegan > omnivore	1.08040	0.00861