Cluster: HRGMv2_2779_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2779
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2779_13 | HRGMv2_2779_13_2 | 271 | 900 | - | 9.B.18.1.1 |
| TC | HRGMv2_2779_13 | HRGMv2_2779_13_3 | 919 | 2835 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_2779_13 | HRGMv2_2779_13_4 | 3110 | 5428 | + | GH95 |
| CAZyme | HRGMv2_2779_13 | HRGMv2_2779_13_5 | 5844 | 7517 | + | CBM35 | GH26 |
Gene ID: HRGMv2_2779_13_2
Type: TC
Location: 271 - 900 (-)
Type: TC
Location: 271 - 900 (-)
Gene ID: HRGMv2_2779_13_3
Type: TC
Location: 919 - 2835 (-)
Type: TC
Location: 919 - 2835 (-)
Gene ID: HRGMv2_2779_13_4
Type: CAZyme
Location: 3110 - 5428 (+)
Type: CAZyme
Location: 3110 - 5428 (+)
Gene ID: HRGMv2_2779_13_5
Type: CAZyme
Location: 5844 - 7517 (+)
Type: CAZyme
Location: 5844 - 7517 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.