Cluster: HRGMv2_2773_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2773
- CGC Family ID: CGCFAM_00252
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2773_8 | HRGMv2_2773_8_16 | 19389 | 20984 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_2773_8 | HRGMv2_2773_8_17 | 21003 | 21800 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2773_8 | HRGMv2_2773_8_18 | 21862 | 22977 | - | Acyl_transf_3 |
| TC | HRGMv2_2773_8 | HRGMv2_2773_8_19 | 23367 | 24818 | + | 4.C.1.1.6 |
| TC | HRGMv2_2773_8 | HRGMv2_2773_8_20 | 24845 | 26305 | + | 4.C.1.1.4 |
| TC | HRGMv2_2773_8 | HRGMv2_2773_8_21 | 26326 | 27798 | + | 4.C.1.1.6 |
Gene ID: HRGMv2_2773_8_16
Type: CAZyme
Location: 19389 - 20984 (-)
Type: CAZyme
Location: 19389 - 20984 (-)
Gene ID: HRGMv2_2773_8_17
Type:
Location: 21003 - 21800 (-)
Type:
Location: 21003 - 21800 (-)
Gene ID: HRGMv2_2773_8_18
Type: pfam
Location: 21862 - 22977 (-)
Type: pfam
Location: 21862 - 22977 (-)
Gene ID: HRGMv2_2773_8_19
Type: TC
Location: 23367 - 24818 (+)
Type: TC
Location: 23367 - 24818 (+)
Gene ID: HRGMv2_2773_8_20
Type: TC
Location: 24845 - 26305 (+)
Type: TC
Location: 24845 - 26305 (+)
Gene ID: HRGMv2_2773_8_21
Type: TC
Location: 26326 - 27798 (+)
Type: TC
Location: 26326 - 27798 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934511465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.