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Cluster: HRGMv2_2773_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2773_5 HRGMv2_2773_5_29 33772 35157 + 2.A.25.1.5
STP HRGMv2_2773_5 HRGMv2_2773_5_30 35287 36576 - Aminotran_1_2
NULL(UNKNOWN) HRGMv2_2773_5 HRGMv2_2773_5_31 37191 39569 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2773_5 HRGMv2_2773_5_32 39765 43037 - 3.A.1.137.2
TC HRGMv2_2773_5 HRGMv2_2773_5_33 43034 43738 - 3.A.1.125.2
pfam HRGMv2_2773_5 HRGMv2_2773_5_34 43968 45446 - Mur_ligase_C | Mur_ligase_M
pfam HRGMv2_2773_5 HRGMv2_2773_5_35 45474 47000 - POTRA_1
CAZyme HRGMv2_2773_5 HRGMv2_2773_5_36 47030 48154 - GT28
TC HRGMv2_2773_5 HRGMv2_2773_5_37 48167 49498 - 2.A.103.1.3
Gene ID: HRGMv2_2773_5_29
Type: TC
Location: 33772 - 35157 (+)
Gene ID: HRGMv2_2773_5_30
Type: STP
Location: 35287 - 36576 (-)
Gene ID: HRGMv2_2773_5_31
Type:
Location: 37191 - 39569 (+)
Gene ID: HRGMv2_2773_5_32
Type: TC
Location: 39765 - 43037 (-)
Gene ID: HRGMv2_2773_5_33
Type: TC
Location: 43034 - 43738 (-)
Gene ID: HRGMv2_2773_5_34
Type: pfam
Location: 43968 - 45446 (-)
Gene ID: HRGMv2_2773_5_35
Type: pfam
Location: 45474 - 47000 (-)
Gene ID: HRGMv2_2773_5_36
Type: CAZyme
Location: 47030 - 48154 (-)
Gene ID: HRGMv2_2773_5_37
Type: TC
Location: 48167 - 49498 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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