Cluster: HRGMv2_2773_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2773
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2773_5 | HRGMv2_2773_5_21 | 22732 | 23418 | + | 2.A.8.1.4 |
| CAZyme | HRGMv2_2773_5 | HRGMv2_2773_5_22 | 23337 | 24497 | - | GT4 |
| pfam | HRGMv2_2773_5 | HRGMv2_2773_5_23 | 24730 | 28926 | - | Flg_new_2 | Flg_new_2 | Flg_new_2 | Flg_new_2 | Flg_new_2 | Flg_new_2 | Flg_new_2 |
| TC | HRGMv2_2773_5 | HRGMv2_2773_5_24 | 29659 | 30174 | + | 3.A.1.26.5 |
Gene ID: HRGMv2_2773_5_21
Type: TC
Location: 22732 - 23418 (+)
Type: TC
Location: 22732 - 23418 (+)
Gene ID: HRGMv2_2773_5_22
Type: CAZyme
Location: 23337 - 24497 (-)
Type: CAZyme
Location: 23337 - 24497 (-)
Gene ID: HRGMv2_2773_5_23
Type: pfam
Location: 24730 - 28926 (-)
Type: pfam
Location: 24730 - 28926 (-)
Gene ID: HRGMv2_2773_5_24
Type: TC
Location: 29659 - 30174 (+)
Type: TC
Location: 29659 - 30174 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934511465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.