Cluster: HRGMv2_2773_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2773
- CGC Family ID: CGCFAM_00688
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2773_52 | HRGMv2_2773_52_2 | 2335 | 3240 | - | GT2 |
| CAZyme | HRGMv2_2773_52 | HRGMv2_2773_52_3 | 3257 | 4129 | - | GT2 |
| TF | HRGMv2_2773_52 | HRGMv2_2773_52_4 | 4240 | 4962 | + | LytTR |
| CAZyme | HRGMv2_2773_52 | HRGMv2_2773_52_5 | 5025 | 6005 | - | GT2 |
| pfam | HRGMv2_2773_52 | HRGMv2_2773_52_6 | 6205 | 6855 | - | Hydrolase | HAD | HAD_2 |
| pfam | HRGMv2_2773_52 | HRGMv2_2773_52_7 | 7005 | 8195 | + | Patatin |
| TC | HRGMv2_2773_52 | HRGMv2_2773_52_8 | 8182 | 9798 | + | 8.A.7.1.5 |
Gene ID: HRGMv2_2773_52_2
Type: CAZyme
Location: 2335 - 3240 (-)
Type: CAZyme
Location: 2335 - 3240 (-)
Gene ID: HRGMv2_2773_52_3
Type: CAZyme
Location: 3257 - 4129 (-)
Type: CAZyme
Location: 3257 - 4129 (-)
Gene ID: HRGMv2_2773_52_4
Type: TF
Location: 4240 - 4962 (+)
Type: TF
Location: 4240 - 4962 (+)
Gene ID: HRGMv2_2773_52_5
Type: CAZyme
Location: 5025 - 6005 (-)
Type: CAZyme
Location: 5025 - 6005 (-)
Gene ID: HRGMv2_2773_52_6
Type: pfam
Location: 6205 - 6855 (-)
Type: pfam
Location: 6205 - 6855 (-)
Gene ID: HRGMv2_2773_52_7
Type: pfam
Location: 7005 - 8195 (+)
Type: pfam
Location: 7005 - 8195 (+)
Gene ID: HRGMv2_2773_52_8
Type: TC
Location: 8182 - 9798 (+)
Type: TC
Location: 8182 - 9798 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934511465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.