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Cluster: HRGMv2_2773_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2773_33 HRGMv2_2773_33_11 8397 9371 - 3.A.1.1.48
TC HRGMv2_2773_33 HRGMv2_2773_33_12 9387 10301 - 3.A.1.1.36
STP HRGMv2_2773_33 HRGMv2_2773_33_13 10420 11775 - SBP_bac_1
TF HRGMv2_2773_33 HRGMv2_2773_33_14 12239 13084 + HTH_6
TC HRGMv2_2773_33 HRGMv2_2773_33_15 13863 15785 + 8.A.59.4.1
pfam HRGMv2_2773_33 HRGMv2_2773_33_16 15949 16998 + SpoIID
CAZyme HRGMv2_2773_33 HRGMv2_2773_33_17 17129 19552 + GT2 | GT2
CAZyme HRGMv2_2773_33 HRGMv2_2773_33_18 19558 20349 + GT2
Gene ID: HRGMv2_2773_33_11
Type: TC
Location: 8397 - 9371 (-)
Gene ID: HRGMv2_2773_33_12
Type: TC
Location: 9387 - 10301 (-)
Gene ID: HRGMv2_2773_33_13
Type: STP
Location: 10420 - 11775 (-)
Gene ID: HRGMv2_2773_33_14
Type: TF
Location: 12239 - 13084 (+)
Gene ID: HRGMv2_2773_33_15
Type: TC
Location: 13863 - 15785 (+)
Gene ID: HRGMv2_2773_33_16
Type: pfam
Location: 15949 - 16998 (+)
Gene ID: HRGMv2_2773_33_17
Type: CAZyme
Location: 17129 - 19552 (+)
Gene ID: HRGMv2_2773_33_18
Type: CAZyme
Location: 19558 - 20349 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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