Cluster: HRGMv2_2773_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2773
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2773_32 | HRGMv2_2773_32_2 | 1285 | 3546 | - | GT35 |
| TF | HRGMv2_2773_32 | HRGMv2_2773_32_3 | 3840 | 4697 | + | HTH_AraC | HTH_AraC |
| TF | HRGMv2_2773_32 | HRGMv2_2773_32_4 | 4744 | 5769 | - | LacI |
| TC | HRGMv2_2773_32 | HRGMv2_2773_32_5 | 6057 | 7739 | + | 4.A.1.1.11 |
| pfam | HRGMv2_2773_32 | HRGMv2_2773_32_6 | 7746 | 8564 | + | Exo_endo_phos |
| CAZyme | HRGMv2_2773_32 | HRGMv2_2773_32_7 | 8582 | 10084 | + | GH77 |
Gene ID: HRGMv2_2773_32_2
Type: CAZyme
Location: 1285 - 3546 (-)
Type: CAZyme
Location: 1285 - 3546 (-)
Gene ID: HRGMv2_2773_32_3
Type: TF
Location: 3840 - 4697 (+)
Type: TF
Location: 3840 - 4697 (+)
Gene ID: HRGMv2_2773_32_4
Type: TF
Location: 4744 - 5769 (-)
Type: TF
Location: 4744 - 5769 (-)
Gene ID: HRGMv2_2773_32_5
Type: TC
Location: 6057 - 7739 (+)
Type: TC
Location: 6057 - 7739 (+)
Gene ID: HRGMv2_2773_32_6
Type: pfam
Location: 7746 - 8564 (+)
Type: pfam
Location: 7746 - 8564 (+)
Gene ID: HRGMv2_2773_32_7
Type: CAZyme
Location: 8582 - 10084 (+)
Type: CAZyme
Location: 8582 - 10084 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934511465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.