Cluster: HRGMv2_2773_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2773
- CGC Family ID: CGCFAM_03138
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2773_25 | HRGMv2_2773_25_17 | 15438 | 16358 | + | 3.A.1.1.11 |
| TC | HRGMv2_2773_25 | HRGMv2_2773_25_18 | 16376 | 17209 | + | 3.A.1.1.36 |
| CAZyme | HRGMv2_2773_25 | HRGMv2_2773_25_19 | 17279 | 18415 | + | GH88 |
| CAZyme | HRGMv2_2773_25 | HRGMv2_2773_25_20 | 18432 | 20402 | + | PL12_1 |
Gene ID: HRGMv2_2773_25_17
Type: TC
Location: 15438 - 16358 (+)
Type: TC
Location: 15438 - 16358 (+)
Gene ID: HRGMv2_2773_25_18
Type: TC
Location: 16376 - 17209 (+)
Type: TC
Location: 16376 - 17209 (+)
Gene ID: HRGMv2_2773_25_19
Type: CAZyme
Location: 17279 - 18415 (+)
Type: CAZyme
Location: 17279 - 18415 (+)
Gene ID: HRGMv2_2773_25_20
Type: CAZyme
Location: 18432 - 20402 (+)
Type: CAZyme
Location: 18432 - 20402 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934511465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.